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RN7SL55P RNA, 7SL, cytoplasmic 55, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479244, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL55Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 55, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46071
See related
Ensembl:ENSG00000243227 AllianceGenome:HGNC:46071
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q25
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (109450772..109451068, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (112752902..112753198, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (110371928..110372224, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene RBMX pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:110314172-110314672 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:110314673-110315173 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:110340209-110340746 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:110354865-110355724 Neighboring gene Sharpr-MPRA regulatory region 6018 Neighboring gene SEC24B antisense RNA 1 Neighboring gene SEC24 homolog B, COPII coat complex component Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:110374133-110374713 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_71781 Neighboring gene microRNA 576 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_71805 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21802 Neighboring gene SET pseudogene 20

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044002.1 

    Range
    101..397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    109450772..109451068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    112752902..112753198 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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