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RN7SKP252 RN7SK pseudogene 252 [ Homo sapiens (human) ]

Gene ID: 106479207, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP252provided by HGNC
Official Full Name
RN7SK pseudogene 252provided by HGNC
Primary source
HGNC:HGNC:45976
See related
Ensembl:ENSG00000223142 AllianceGenome:HGNC:45976
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
22q13.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (49738677..49739003)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (50242976..50243302)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (50132325..50132651)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124905145 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50058278-50058808 Neighboring gene MPRA-validated peak4519 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13920 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13921 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50070999-50071498 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:50083997-50084790 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50088046-50088546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50108921-50109642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50109643-50110363 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr22:50111085-50111805 Neighboring gene uncharacterized LOC124905146 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50112432-50112944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:50117534-50118264 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:50118265-50118995 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19280 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:50156966-50157749 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:50157750-50158532 Neighboring gene ribosomal protein L5 pseudogene 35 Neighboring gene Sharpr-MPRA regulatory region 11654 Neighboring gene bromodomain containing 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50199181-50199681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50209067-50209610 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:50209611-50210153 Neighboring gene suppressor of cytokine signaling 2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 252

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043738.1 

    Range
    101..427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    49738677..49739003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    50242976..50243302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases