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RN7SKP225 RN7SK pseudogene 225 [ Homo sapiens (human) ]

Gene ID: 106479195, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP225provided by HGNC
Official Full Name
RN7SK pseudogene 225provided by HGNC
Primary source
HGNC:HGNC:45949
See related
Ensembl:ENSG00000222337 AllianceGenome:HGNC:45949
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
9q22.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (99284022..99284373)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (111455715..111456066)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (102046304..102046655)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28702 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_103905 Neighboring gene SEC61 translocon subunit beta Neighboring gene uncharacterized LOC124902230 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28703 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28704 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28705 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28706 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20127 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28707 Neighboring gene uncharacterized LOC124902231 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:102068645-102069144 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28708 Neighboring gene keratin 8 pseudogene 11 Neighboring gene uncharacterized LOC124902232 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28709 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:102131371-102131952 Neighboring gene non-protein coding RNA, associated with MAP kinase pathway and growth arrest

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 225

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043648.1 

    Range
    101..452
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    99284022..99284373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    111455715..111456066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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