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RN7SKP222 RN7SK pseudogene 222 [ Homo sapiens (human) ]

Gene ID: 106479193, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP222provided by HGNC
Official Full Name
RN7SK pseudogene 222provided by HGNC
Primary source
HGNC:HGNC:45946
See related
Ensembl:ENSG00000222583 AllianceGenome:HGNC:45946
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP222 in Genome Data Viewer
Location:
3q28
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (192093124..192093378)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (194789323..194789577)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (191810913..191811167)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene PERP, TP53 apoptosis effector pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:191680691-191681890 Neighboring gene NANOG hESC enhancer GRCh37_chr3:191715521-191716072 Neighboring gene uncharacterized LOC105374277 Neighboring gene uncharacterized LOC124906318 Neighboring gene Sharpr-MPRA regulatory region 9727 Neighboring gene NANOG hESC enhancer GRCh37_chr3:191903818-191904328 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15006 Neighboring gene uncharacterized LOC124906320 Neighboring gene fibroblast growth factor 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 222

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043633.1 

    Range
    101..355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    192093124..192093378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    194789323..194789577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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