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RN7SKP167 RN7SK pseudogene 167 [ Homo sapiens (human) ]

Gene ID: 106479169, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP167provided by HGNC
Official Full Name
RN7SK pseudogene 167provided by HGNC
Primary source
HGNC:HGNC:45891
See related
Ensembl:ENSG00000222979 AllianceGenome:HGNC:45891
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP167 in Genome Data Viewer
Location:
10q26.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (121410916..121411200)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (122307013..122307297)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (123170430..123170714)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902515 Neighboring gene uncharacterized LOC105378523 Neighboring gene long intergenic non-protein coding RNA 1153 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_10514 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:123048706-123049666 Neighboring gene MPRA-validated peak1116 silencer Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:123099460-123100020 Neighboring gene MPRA-validated peak1117 silencer Neighboring gene MPRA-validated peak1118 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123218320-123219309 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123244583-123245116 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123270400-123270915 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_10566 Neighboring gene fibroblast growth factor receptor 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123302809-123303308 Neighboring gene Sharpr-MPRA regulatory region 8577 Neighboring gene Sharpr-MPRA regulatory region 287 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123340529-123341307 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123353419-123353947 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123355693-123356428 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:123356429-123357164 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2885 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:123370062-123371261 Neighboring gene uncharacterized LOC107984183 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123383269-123383770 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123383771-123384270 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:123403785-123404286

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 167

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043444.1 

    Range
    101..385
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    121410916..121411200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    122307013..122307297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases