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RN7SKP143 RN7SK pseudogene 143 [ Homo sapiens (human) ]

Gene ID: 106479158, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP143provided by HGNC
Official Full Name
RN7SK pseudogene 143provided by HGNC
Primary source
HGNC:HGNC:45867
See related
Ensembl:ENSG00000222451 AllianceGenome:HGNC:45867
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP143 in Genome Data Viewer
Location:
10q23.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (90163699..90163960, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (91047274..91047535, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (91923456..91923717, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr10:91680718-91681917 Neighboring gene long intergenic non-protein coding RNA 1375 Neighboring gene small nuclear ribonucleoprotein D2 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3753 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3754 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:91840789-91841572 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:91846089-91846768 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2599 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:91918903-91919402 Neighboring gene uncharacterized LOC105378426 Neighboring gene NANOG hESC enhancer GRCh37_chr10:91951269-91951830 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:92010611-92011239 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:92061535-92062047 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:92062048-92062560 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:92078769-92079504 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:92079505-92080238 Neighboring gene long intergenic non-protein coding RNA 2653 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:92243978-92245177

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 143

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043358.1 

    Range
    101..362
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    90163699..90163960 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    91047274..91047535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases