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RN7SKP136 RN7SK pseudogene 136 [ Homo sapiens (human) ]

Gene ID: 106479155, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP136provided by HGNC
Official Full Name
RN7SK pseudogene 136provided by HGNC
Primary source
HGNC:HGNC:45860
See related
Ensembl:ENSG00000222859 AllianceGenome:HGNC:45860
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP136 in Genome Data Viewer
Location:
4q34.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (177181442..177181741)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (180520548..180520847)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (178102596..178102895)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:177613493-177614380 Neighboring gene HuR (ELAVL1) associated fibroblast migratory lncRNA Neighboring gene vascular endothelial growth factor C Neighboring gene long intergenic non-protein coding RNA 2509 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:178112608-178113209 Neighboring gene uncharacterized LOC105377557 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:178176457-178176976 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22169 Neighboring gene uncharacterized LOC105377558 Neighboring gene Sharpr-MPRA regulatory region 1660 Neighboring gene nei like DNA glycosylase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 136

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043335.1 

    Range
    101..400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    177181442..177181741
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    180520548..180520847
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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