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RN7SKP100 RN7SK pseudogene 100 [ Homo sapiens (human) ]

Gene ID: 106479139, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP100provided by HGNC
Official Full Name
RN7SK pseudogene 100provided by HGNC
Primary source
HGNC:HGNC:45824
See related
Ensembl:ENSG00000223190 AllianceGenome:HGNC:45824
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SKP100 in Genome Data Viewer
Location:
20q12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (43063326..43063609)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (44795912..44796195)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (41691966..41692249)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type T Neighboring gene uncharacterized LOC105372623 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr20:41614665-41615864 Neighboring gene PTPRT antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:41733081-41733580 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:41804429-41805039 Neighboring gene RNA, 7SL, cytoplasmic 666, pseudogene Neighboring gene PTPRT divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 100

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043191.1 

    Range
    101..384
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    43063326..43063609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    44795912..44796195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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