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RNU7-143P RNA, U7 small nuclear 143 pseudogene [ Homo sapiens (human) ]

Gene ID: 106479078, updated on 10-Oct-2023

Summary

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Official Symbol
RNU7-143Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 143 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:45677
See related
Ensembl:ENSG00000252590 AllianceGenome:HGNC:45677
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
7p15.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (23450658..23450722)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (23587077..23587141)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (23490277..23490341)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25724 Neighboring gene MPRA-validated peak6435 silencer Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene insulin like growth factor 2 mRNA binding protein 3 Neighboring gene Sharpr-MPRA regulatory region 6228 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:23394340-23394499 Neighboring gene Sharpr-MPRA regulatory region 10260 Neighboring gene small nucleolar RNA, C/D box 65C Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25725 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23474935-23475436 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25726 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:23508953-23509537 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18011 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25727 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25728 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18012 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25729 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18013 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25730 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25731 Neighboring gene chromosome 5 open reading frame 13 pseudogene Neighboring gene ribosomal protein S2 pseudogene 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044725.1 

    Range
    101..165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    23450658..23450722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    23587077..23587141
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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