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RNU6-62P RNA, U6 small nuclear 62, pseudogene [ Homo sapiens (human) ]

Gene ID: 106478987, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-62Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 62, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42552
See related
Ensembl:ENSG00000252335 AllianceGenome:HGNC:42552
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-62
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Genomic context

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Location:
13q32.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (95019235..95019336)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (94222830..94222931)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (95671489..95671590)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927284 Neighboring gene ribosomal protein L21 pseudogene 112 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr13:95600109-95600726 Neighboring gene VISTA enhancers hs189 and hs341 Neighboring gene long intergenic non-protein coding RNA 557 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:95648475-95649263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7867 Neighboring gene ATP binding cassette subfamily C member 4 (PEL blood group) Neighboring gene NANOG hESC enhancer GRCh37_chr13:95826697-95827198 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7868 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:95845687-95846187 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:95856177-95856677 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:95861642-95862841 Neighboring gene Sharpr-MPRA regulatory region 4491 Neighboring gene small nucleolar RNA, C/D box 13G Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7869 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7870 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7871 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7872 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5436 Neighboring gene uncharacterized LOC124903192

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043992.1 

    Range
    101..202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    95019235..95019336
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    94222830..94222931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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