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OOEP-AS1 OOEP antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 106478938, updated on 10-Oct-2023

Summary

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Official Symbol
OOEP-AS1provided by HGNC
Official Full Name
OOEP antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:39192
See related
Ensembl:ENSG00000231332 AllianceGenome:HGNC:39192
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OOEP-AS
Expression
Low expression observed in reference dataset See more
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Genomic context

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See OOEP-AS1 in Genome Data Viewer
Location:
6q13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (73369704..73387717)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (74546402..74564417)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (74079427..74097440)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:74063051-74063552 Neighboring gene H3K27ac hESC enhancer GRCh37_chr6:74063553-74064052 Neighboring gene developmental pluripotency associated 5 Neighboring gene KH domain containing 3 like, subcortical maternal complex member Neighboring gene oocyte expressed protein Neighboring gene ribosomal protein L39 pseudogene 3 Neighboring gene small nucleolar RNA U13 Neighboring gene ribosomal protein S6 pseudogene 8 Neighboring gene oocyte expressed protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

Genotypes

General gene information

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Other Names

  • OOEP antisense RNA (non-protein coding)
  • OOEP antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_174946.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DB456122
    Related
    ENST00000445350.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    73369704..73387717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    74546402..74564417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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