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DPH3P2 diphthamide biosynthesis 3 pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 106478926, updated on 10-Oct-2023

Summary

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Official Symbol
DPH3P2provided by HGNC
Official Full Name
diphthamide biosynthesis 3 pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:38719
See related
Ensembl:ENSG00000237040 Ensembl:ENSG00000292365 AllianceGenome:HGNC:38719
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq28 and Yq12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (155875636..155875885)
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (57062156..57062405)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (154103628..154103877)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (62300583..62300832)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (155105299..155105548)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (59208305..59208554)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene trimethyllysine hydroxylase, epsilon Neighboring gene ATAC-STARR-seq lymphoblastoid active region 30078 Neighboring gene sprouty RTK signaling antagonist 3 Neighboring gene meiotic recombination hotspot PAR2A Neighboring gene meiotic recombination hotspot PAR2 Neighboring gene adenosylmethionine decarboxylase 1 pseudogene 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:155137478-155138029 Neighboring gene vesicle associated membrane protein 7 Neighboring gene NANOG hESC enhancer GRCh37_chrY:59291828-59292346 Neighboring gene uncharacterized LOC124905299

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene meiotic recombination hotspot PAR2A Neighboring gene sprouty RTK signaling antagonist 3 Neighboring gene meiotic recombination hotspot PAR2 Neighboring gene adenosylmethionine decarboxylase 1 pseudogene 2 Neighboring gene vesicle associated membrane protein 7 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:155137478-155138029 Neighboring gene NANOG hESC enhancer GRCh37_chrY:59291828-59292346 Neighboring gene uncharacterized LOC124905309

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • DPH3, KTI11 homolog pseudogene 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044993.1 

    Range
    101..350
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    155875636..155875885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    57062156..57062405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    154103628..154103877
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    62300583..62300832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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