U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AU015336 expressed sequence AU015336 [ Mus musculus (house mouse) ]

Gene ID: 106309, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
AU015336provided by MGI
Official Full Name
expressed sequence AU015336provided by MGI
Primary source
MGI:MGI:2146536
See related
AllianceGenome:MGI:2146536
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
16 17.7 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (25850560..25860018, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 24928 Neighboring gene transformation related protein 63 Neighboring gene C15 enhancer in intron of tumor protein p63 gene Neighboring gene STARR-seq mESC enhancer starr_40480 Neighboring gene STARR-seq mESC enhancer starr_40481 Neighboring gene DeltaNp63 promoter of tumor protein p63 Neighboring gene STARR-seq mESC enhancer starr_40482 Neighboring gene C40 intronic enhancer of tumor protein p63 gene Neighboring gene predicted gene 4524 Neighboring gene VISTA enhancer mm1095 Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene VISTA enhancer mm1097 Neighboring gene STARR-seq mESC enhancer starr_40483 Neighboring gene STARR-seq mESC enhancer starr_40484 Neighboring gene predicted gene, 41436 Neighboring gene claudin 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000082.7 Chromosome 16 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
  2. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_188879.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC109213

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    25850560..25860018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases