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Gm27021 predicted gene, 27021 [ Mus musculus (house mouse) ]

Gene ID: 105734727, updated on 8-Feb-2024

Summary

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Official Symbol
Gm27021provided by MGI
Official Full Name
predicted gene, 27021provided by MGI
Primary source
MGI:MGI:5504136
See related
Ensembl:ENSMUSG00000097919 AllianceGenome:MGI:5504136
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Emc8-1190005i06rik
Summary
This locus represents naturally occurring readthrough transcription between the neighboring ER membrane protein complex subunit 8 and RIKEN cDNA 1190005I06 genes on chromosome 8. The readthrough transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, May 2015]
Expression
Ubiquitous expression in ovary adult (RPKM 43.1), adrenal adult (RPKM 38.3) and 28 other tissues See more
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Genomic context

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Location:
8 E1; 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (121335339..121394881, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (120608600..120668142, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene genetic suppressor element 1, coiled-coil protein Neighboring gene STARR-positive B cell enhancer ABC_E246 Neighboring gene RIKEN cDNA 1190005I06 gene Neighboring gene predicted gene 10614 Neighboring gene GINS complex subunit 2 Neighboring gene STARR-seq mESC enhancer starr_22909 Neighboring gene predicted gene, 33075 Neighboring gene ER membrane protein complex subunit 8 Neighboring gene cytochrome c oxidase subunit 4I1 Neighboring gene predicted gene, 39265

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC105734727
Names
Emc8-1190005I06Rik readthrough

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001308449.1 → NP_001295378.1  uncharacterized protein LOC105734727

    Status: VALIDATED

    Source sequence(s)
    AC103360, AEKQ02009813, AI844196, BQ746342
    UniProtKB/TrEMBL
    M0QWE2
    Related
    ENSMUSP00000137785.2, ENSMUST00000181333.2
    Conserved Domains (2) summary
    pfam15366
    Location:93 → 155
    DUF4597; Domain of unknown function (DUF4597)
    cl13996
    Location:6 → 75
    MPN; Mpr1p, Pad1p N-terminal (MPN) domains

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    121335339..121394881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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