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LOC105379444 uncharacterized LOC105379444 [ Homo sapiens (human) ]

Gene ID: 105379444, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105379444
Gene description
uncharacterized LOC105379444
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in testis (RPKM 6.5), kidney (RPKM 1.4) and 16 other tissues See more
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Genomic context

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Location:
9q21.11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (65383154..65384351)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (48141620..48142817)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70176808-70177339 Neighboring gene forkhead box D4 like 5 Neighboring gene Zn regulated GTPase metalloprotein activator 1D, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70199418-70199944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70199945-70200469 Neighboring gene uncharacterized LOC107987069 Neighboring gene uncharacterized LOC105379446

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    65383154..65384351
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_950677.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    48141620..48142817
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080270.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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