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BMP8B-AS1 BMP8B antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105378666, updated on 10-Oct-2023

Summary

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Official Symbol
BMP8B-AS1provided by HGNC
Official Full Name
BMP8B antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:54364
See related
Ensembl:ENSG00000285905 AllianceGenome:HGNC:54364
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.6) See more
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Genomic context

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Location:
1p34.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (39779969..39781424)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (39649413..39650868)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 816 Neighboring gene peptidylprolyl isomerase E Neighboring gene bone morphogenetic protein 8b Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:40236393-40237066 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40237067-40237739 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 817 Neighboring gene 3-oxoacid CoA-transferase 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40244416-40244916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40254643-40255144 Neighboring gene uncharacterized LOC101929536 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 819 Neighboring gene uncharacterized LOC130932201 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:40265165-40265697 Neighboring gene long intergenic non-protein coding RNA 2811

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    39779969..39781424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_947220.3 RNA Sequence

    Related
    ENST00000648746.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    39649413..39650868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070105.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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