U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DUSP5-DT DUSP5 divergent transcript [ Homo sapiens (human) ]

Gene ID: 105378481, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
DUSP5-DTprovided by HGNC
Official Full Name
DUSP5 divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55154
See related
AllianceGenome:HGNC:55154
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DUSP5-DT in Genome Data Viewer
Location:
10q25.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (110474342..110496482, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (111358145..111380291, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4020 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4021 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:112190742-112191347 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4023 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4024 Neighboring gene high mobility group box 3 pseudogene 5 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:112219715-112220914 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4028 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4027 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:112256187-112256710 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2815 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2816 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2817 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4029 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4030 Neighboring gene dual specificity phosphatase 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4031 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4032 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4033 Neighboring gene Sharpr-MPRA regulatory region 14569 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4034 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2819 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4035 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4036 Neighboring gene ribosomal protein L7 pseudogene 35

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_187547.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL355512

  2. NR_187548.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL355512

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    110474342..110496482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    111358145..111380291 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases