U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ANK2-AS1 ANK2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105377373, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
ANK2-AS1provided by HGNC
Official Full Name
ANK2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40076
See related
Ensembl:ENSG00000248152 AllianceGenome:HGNC:40076
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4q25
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (113029399..113044829, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (116337954..116353195, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene uncharacterized LOC102723896 Neighboring gene Sharpr-MPRA regulatory region 8329 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:113879232-113879899 Neighboring gene uncharacterized LOC124900761 Neighboring gene NANOG hESC enhancer GRCh37_chr4:113945514-113946051 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:113981923-113982493 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:113985214-113985864 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:113987456-113987956 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:114066308-114066916 Neighboring gene microRNA 1243 Neighboring gene microRNA 8082

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    113029399..113044829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007058232.1 RNA Sequence

    Related
    ENST00000661685.1

  2. XR_001741419.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    116337954..116353195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074898.1 RNA Sequence

  2. XR_007074897.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases