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LOC105376654 uncharacterized LOC105376654 [ Homo sapiens (human) ]

Gene ID: 105376654, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105376654
Gene description
uncharacterized LOC105376654
See related
Ensembl:ENSG00000254746
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
11p11.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (45486848..45542474, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (45642591..45698401, complement)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2696 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:45400447-45400946 Neighboring gene long intergenic non-protein coding RNA 2687 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45406257-45406938 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45432676-45433336 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45433337-45433998 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:45444460-45444960 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45489326-45489860 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:45489861-45490395 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 37 Neighboring gene uncharacterized LOC105376655 Neighboring gene uncharacterized LOC105376656

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    45486848..45542474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_931245.4 RNA Sequence

    Related
    ENST00000662539.1

  2. XR_001748204.3 RNA Sequence

    Related
    ENST00000654281.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060935.1 Alternate T2T-CHM13v2.0

    Range
    45642591..45698401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007082029.1 RNA Sequence

  2. XR_007082030.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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