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LOC105375861 uncharacterized LOC105375861 [ Homo sapiens (human) ]

Gene ID: 105375861, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105375861
Gene description
uncharacterized LOC105375861
See related
Ensembl:ENSG00000254775
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
8q12.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (60046808..60116460)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (60470794..60540496)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375860 Neighboring gene uncharacterized LOC105375859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19223 Neighboring gene MPRA-validated peak7043 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27417 Neighboring gene small integral membrane protein 15-like Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:60787467-60788108 Neighboring gene Sharpr-MPRA regulatory region 15202 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27418 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27419 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27420 Neighboring gene MPRA-validated peak7046 silencer Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:61042587-61043088 Neighboring gene uncharacterized LOC105375863 Neighboring gene SLC2A13 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    60046808..60116460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745714.3 RNA Sequence

  2. XR_007060918.1 RNA Sequence

  3. XR_002956710.2 RNA Sequence

    Related
    ENST00000658762.1

  4. XR_001745716.3 RNA Sequence

    Related
    ENST00000665094.1

  5. XR_001745717.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    60470794..60540496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079020.1 RNA Sequence

  2. XR_007079023.1 RNA Sequence

  3. XR_007079021.1 RNA Sequence

  4. XR_007079019.1 RNA Sequence

  5. XR_007079022.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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