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LINC02845 long intergenic non-protein coding RNA 2845 [ Homo sapiens (human) ]

Gene ID: 105375680, updated on 10-Oct-2023

Summary

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Official Symbol
LINC02845provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2845provided by HGNC
Primary source
HGNC:HGNC:54380
See related
Ensembl:ENSG00000253644 AllianceGenome:HGNC:54380
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LINC02845 in Genome Data Viewer
Location:
8q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (101387299..101393246, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (102513013..102518956, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene double homeobox A pseudogene 2 Neighboring gene uncharacterized LOC107986897 Neighboring gene NACA family member 4, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 563, pseudogene Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:102472256-102472756 Neighboring gene Sharpr-MPRA regulatory region 9085 Neighboring gene GRHL2 divergent transcript Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:102504685-102505213 Neighboring gene grainyhead like transcription factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    101387299..101393246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_928471.2 RNA Sequence

    Related
    ENST00000518612.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    102513013..102518956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079293.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases