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LINC01918 long intergenic non-protein coding RNA 1918 [ Homo sapiens (human) ]

Gene ID: 105373984, updated on 10-Oct-2023

Summary

Official Symbol
LINC01918provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1918provided by HGNC
Primary source
HGNC:HGNC:52737
See related
Ensembl:ENSG00000226508 AllianceGenome:HGNC:52737
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
2q12.1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (105144113..105145424)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (105605239..105606550)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (105760571..105761882)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MRPS9 antisense RNA 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:105654567-105655509 Neighboring gene mitochondrial ribosomal protein S9 Neighboring gene VISTA enhancer hs868 Neighboring gene uncharacterized LOC105373527 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:105719958-105720819 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:105720820-105721680 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:105725341-105726149 Neighboring gene MRPS9 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:105735229-105735730 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:105735731-105736230 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr2:105794407-105794906 Neighboring gene uncharacterized LOC105373528 Neighboring gene NANOG hESC enhancer GRCh37_chr2:105813700-105814274 Neighboring gene G protein-coupled receptor 45

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136172.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104655, AI493650, BE407125
    Related
    ENST00000438148.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    105144113..105145424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    105605239..105606550
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)