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LOC105373845 uncharacterized LOC105373845 [ Homo sapiens (human) ]

Gene ID: 105373845, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105373845
Gene description
uncharacterized LOC105373845
See related
Ensembl:ENSG00000237843
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105373845 in Genome Data Viewer
Location:
2q33.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (204473812..204476022)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (204956111..204958322)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:205186360-205187559 Neighboring gene NANOG hESC enhancer GRCh37_chr2:205211004-205211547 Neighboring gene carboxymethylenebutenolidase homolog (Pseudomonas) pseudogene Neighboring gene DSTN pseudogene 5 Neighboring gene NANOG hESC enhancer GRCh37_chr2:205302984-205303531 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:205316652-205317851 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:205318757-205319257 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:205338259-205339458 Neighboring gene MPRA-validated peak4022 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12260 Neighboring gene uncharacterized LOC124907967 Neighboring gene par-3 family cell polarity regulator beta Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:205529451-205530018 Neighboring gene uncharacterized LOC124907968

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    204473812..204476022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_923799.3 RNA Sequence

    Related
    ENST00000656172.1

  2. XR_923798.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    204956111..204958322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072785.1 RNA Sequence

  2. XR_007072786.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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