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LINC01935 long intergenic non-protein coding RNA 1935 [ Homo sapiens (human) ]

Gene ID: 105373519, updated on 10-Oct-2023

Summary

Official Symbol
LINC01935provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1935provided by HGNC
Primary source
HGNC:HGNC:52758
See related
Ensembl:ENSG00000224095 AllianceGenome:HGNC:52758
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
2q12.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (102967408..102984429, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (103426130..103443150, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (103583866..103600887, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11834 Neighboring gene transmembrane protein 182 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16308 Neighboring gene long intergenic non-protein coding RNA 1796 Neighboring gene VISTA enhancer hs1212 Neighboring gene uncharacterized LOC124907862 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr2:103751570-103752769 Neighboring gene VISTA enhancer hs1581 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:103785519-103785622 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:103791009-103792208 Neighboring gene VISTA enhancer hs1093 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:103898787-103898965 Neighboring gene VISTA enhancer hs1112 Neighboring gene VISTA enhancer hs1555 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:104051012-104052211 Neighboring gene CRLF3 pseudogene 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135530.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108051
    Related
    ENST00000431897.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    102967408..102984429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    103426130..103443150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)