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LINC01837 long intergenic non-protein coding RNA 1837 [ Homo sapiens (human) ]

Gene ID: 105372363, updated on 10-Oct-2023

Summary

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Official Symbol
LINC01837provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1837provided by HGNC
Primary source
HGNC:HGNC:52653
See related
Ensembl:ENSG00000267489 AllianceGenome:HGNC:52653
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
19q12-q13.11
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (31837380..32072099, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (34355902..34590647, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372362 Neighboring gene RNA, U6 small nuclear 967, pseudogene Neighboring gene VISTA enhancer hs536 Neighboring gene uncharacterized LOC105372364 Neighboring gene long intergenic non-protein coding RNA 1533 Neighboring gene uncharacterized LOC105376899 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr19:32589463-32590283 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr19:32594598-32595797 Neighboring gene long intergenic non-protein coding RNA 1782

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    31837380..32072099 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007067222.1 RNA Sequence

  2. XR_007067219.1 RNA Sequence

  3. XR_007067217.1 RNA Sequence

  4. XR_007067223.1 RNA Sequence

  5. XR_007067220.1 RNA Sequence

  6. XR_001753924.2 RNA Sequence

  7. XR_001753921.2 RNA Sequence

  8. XR_001753916.2 RNA Sequence

  9. XR_007067221.1 RNA Sequence

  10. XR_001753907.2 RNA Sequence

  11. XR_001753904.2 RNA Sequence

  12. XR_001753912.2 RNA Sequence

  13. XR_001753913.2 RNA Sequence

  14. XR_001753909.2 RNA Sequence

  15. XR_001753923.1 RNA Sequence

  16. XR_007067218.1 RNA Sequence

  17. XR_002958400.1 RNA Sequence

  18. XR_001753925.1 RNA Sequence

  19. XR_001753908.2 RNA Sequence

  20. XR_001753905.2 RNA Sequence

  21. XR_002958401.2 RNA Sequence

    Related
    ENST00000656165.1

  22. XR_001753919.2 RNA Sequence

  23. XR_001753920.2 RNA Sequence

  24. XR_001753918.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    34355902..34590647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007089087.1 RNA Sequence

  2. XR_007089077.1 RNA Sequence

  3. XR_007089073.1 RNA Sequence

  4. XR_007089089.1 RNA Sequence

  5. XR_007089081.1 RNA Sequence

  6. XR_007089076.1 RNA Sequence

  7. XR_007089093.1 RNA Sequence

  8. XR_007089088.1 RNA Sequence

  9. XR_007089083.1 RNA Sequence

  10. XR_007089082.1 RNA Sequence

  11. XR_007089071.1 RNA Sequence

  12. XR_007089086.1 RNA Sequence

  13. XR_007089078.1 RNA Sequence

  14. XR_007089074.1 RNA Sequence

  15. XR_007089080.1 RNA Sequence

  16. XR_007089075.1 RNA Sequence

  17. XR_007089072.1 RNA Sequence

  18. XR_007089070.1 RNA Sequence

  19. XR_007089084.1 RNA Sequence

  20. XR_007089079.1 RNA Sequence

  21. XR_007089085.1 RNA Sequence

  22. XR_007089091.1 RNA Sequence

  23. XR_007089092.1 RNA Sequence

  24. XR_007089090.1 RNA Sequence

Nucleotide Protein
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