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LOC105372132 uncharacterized LOC105372132 [ Homo sapiens (human) ]

Gene ID: 105372132, updated on 10-Oct-2023

Summary

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Gene symbol
LOC105372132
Gene description
uncharacterized LOC105372132
See related
Ensembl:ENSG00000267732
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
18q21.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (56137578..56150206)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (56340278..56352813)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 3069 Neighboring gene long intergenic non-protein coding RNA 1905 Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene long intergenic non-protein coding RNA 1539 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13361 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9475 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13362 Neighboring gene NANOG hESC enhancer GRCh37_chr18:54019108-54019609 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr18:54080945-54081494 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr18:54087957-54088683 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:54230563-54231064 Neighboring gene uncharacterized LOC105372135 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:54304875-54305860 Neighboring gene thioredoxin like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    56137578..56150206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_935498.4 RNA Sequence

    Related
    ENST00000654480.1

  2. XR_007066384.1 RNA Sequence

    Related
    ENST00000590589.2

  3. XR_007066385.1 RNA Sequence

  4. XR_007066386.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    56340278..56352813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007088197.1 RNA Sequence

  2. XR_007088198.1 RNA Sequence

  3. XR_007088199.1 RNA Sequence

  4. XR_007088200.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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