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LOC105372069 uncharacterized LOC105372069 [ Homo sapiens (human) ]

Gene ID: 105372069, updated on 10-Oct-2023

Summary

Gene symbol
LOC105372069
Gene description
uncharacterized LOC105372069
See related
Ensembl:ENSG00000267039
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
18q12.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (36901945..36923814, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (37095105..37116974, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (34481908..34503777, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene formin homology 2 domain containing 3 Neighboring gene uncharacterized LOC105372071 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13241 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:34254255-34254481 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:34287179-34287680 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13242 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:34349653-34349798 Neighboring gene NANOG hESC enhancer GRCh37_chr18:34367445-34367994 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13243 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:34408535-34409327 Neighboring gene KIAA1328 Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:34527890-34528524 Neighboring gene uncharacterized LOC124904287 Neighboring gene VISTA enhancer hs590 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:34745369-34745869 Neighboring gene Sharpr-MPRA regulatory region 1146 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:34797958-34798476 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr18:34798477-34798995 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:34829500-34830000 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:34830001-34830501 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9407 Neighboring gene uncharacterized LOC105372068 Neighboring gene CUGBP Elav-like family member 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_134585.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA021096, BC037214
    Related
    ENST00000586106.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    36901945..36923814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    37095105..37116974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)