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LOC105370616 uncharacterized LOC105370616 [ Homo sapiens (human) ]

Gene ID: 105370616, updated on 28-Oct-2023

Summary

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Gene symbol
LOC105370616
Gene description
uncharacterized LOC105370616
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
14q32.11
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (89628921..89642081, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (83852746..83865903, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene forkhead box N3 Neighboring gene FOXN3 antisense RNA 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8867 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8868 Neighboring gene H3K27ac hESC enhancers GRCh37_chr14:90084905-90085406 and GRCh37_chr14:90085407-90085906 Neighboring gene uncharacterized LOC105370617 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:90091889-90092462 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8869 Neighboring gene RN7SK pseudogene 107 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8870 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:90132444-90132641 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6002 Neighboring gene RN7SK pseudogene 255 Neighboring gene cysteine and histidine rich domain containing 2, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_188191.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL137230

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    89628921..89642081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    83852746..83865903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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