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FBXO34-AS1 FBXO34 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 105370509, updated on 10-Oct-2023

Summary

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Official Symbol
FBXO34-AS1provided by HGNC
Official Full Name
FBXO34 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:55450
See related
Ensembl:ENSG00000258413 AllianceGenome:HGNC:55450
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 6.8) See more
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Genomic context

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See FBXO34-AS1 in Genome Data Viewer
Location:
14q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (55262231..55272078, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (49467461..49477302, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 L1 (pseudogene) Neighboring gene cytochrome c oxidase subunit 5A pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5781 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8428 Neighboring gene ReSE screen-validated silencer GRCh37_chr14:55754571-55754700 Neighboring gene F-box protein 34 Neighboring gene ribosomal protein L34 pseudogene 28 Neighboring gene charged multivesicular body protein 4B pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_184222.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL158801

  2. NR_184223.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL158801
    Related
    ENST00000660805.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    55262231..55272078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    49467461..49477302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases