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LINC02468 long intergenic non-protein coding RNA 2468 [ Homo sapiens (human) ]

Gene ID: 105369684, updated on 10-Oct-2023

Summary

Official Symbol
LINC02468provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2468provided by HGNC
Primary source
HGNC:HGNC:53406
See related
AllianceGenome:HGNC:53406
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
12p12.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (20120980..20127901, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (19999397..20006317, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (20273914..20280835, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2398 Neighboring gene uncharacterized LOC124902893 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:20188644-20188839 Neighboring gene uncharacterized LOC105369685 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:20267735-20268236 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:20268237-20268736 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6085 Neighboring gene uncharacterized LOC105369686 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:20365093-20365834 Neighboring gene uncharacterized LOC105369687 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:20365835-20366575

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146523.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC087587

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    20120980..20127901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    19999397..20006317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)