U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gm29398 predicted gene 29398 [ Mus musculus (house mouse) ]

Gene ID: 105246724, updated on 8-Feb-2024

Summary

Go to the top of the page Help
Official Symbol
Gm29398provided by MGI
Official Full Name
predicted gene 29398provided by MGI
Primary source
MGI:MGI:5580104
See related
AllianceGenome:MGI:5580104
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Gm29398 in Genome Data Viewer
Location:
1 G1; 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (149286471..149325702, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (149410729..149449972, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene inner membrane protein, mitochondrial pseudogene Neighboring gene 5'-nucleotidase domain containing 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_02580 Neighboring gene STARR-seq mESC enhancer starr_02581 Neighboring gene STARR-seq mESC enhancer starr_02582 Neighboring gene STARR-seq mESC enhancer starr_02583 Neighboring gene STARR-seq mESC enhancer starr_02584 Neighboring gene STARR-seq mESC enhancer starr_02585 Neighboring gene STARR-seq mESC enhancer starr_02586 Neighboring gene predicted gene, 23535 Neighboring gene STARR-seq mESC enhancer starr_02587 Neighboring gene STARR-seq mESC enhancer starr_02588 Neighboring gene phospholipase A2, group IVA (cytosolic, calcium-dependent) Neighboring gene STARR-seq mESC enhancer starr_02589

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    149286471..149325702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_878598.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.