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Zfp999 zinc finger protein 999 [ Mus musculus (house mouse) ]

Gene ID: 105245577, updated on 8-Feb-2024

Summary

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Official Symbol
Zfp999provided by MGI
Official Full Name
zinc finger protein 999provided by MGI
Primary source
MGI:MGI:3704404
See related
AllianceGenome:MGI:3704404
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10772
Summary
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
13 B3; 13 34.51 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (66374938..66391905, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene upstream binding transcription factor, RNA polymerase I pseudogene Neighboring gene STARR-seq mESC enhancer starr_34861 Neighboring gene predicted gene, 45965 Neighboring gene vomeronasal 2, receptor, pseudogene 102 Neighboring gene STARR-seq mESC enhancer starr_34863 Neighboring gene STARR-seq mESC enhancer starr_34864 Neighboring gene predicted gene, 57609 Neighboring gene vomeronasal 2, receptor, pseudogene 103 Neighboring gene STARR-seq mESC enhancer starr_34865 Neighboring gene predicted gene, 21029

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000079.7 Chromosome 13 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Rapid and efficient cloning of cDNAs encoding Krüppel-like zinc finger proteins by degenerate PCR. Agata Y, et al. Gene, 1998 Jun 15. PMID 9630514
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
zinc finger protein 431-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    66374938..66391905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036158263.1 → XP_036014156.1  zinc finger protein 431-like

    Conserved Domains (4) summary
    COG5048
    Location:161 → 316
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:137 → 157
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:4 → 44
    KRAB; KRAB box
    pfam13465
    Location:317 → 342
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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