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Gm40909 predicted gene, 40909 [ Mus musculus (house mouse) ]

Gene ID: 105245459, updated on 8-Feb-2024

Summary

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Official Symbol
Gm40909provided by MGI
Official Full Name
predicted gene, 40909provided by MGI
Primary source
MGI:MGI:5623794
See related
Ensembl:ENSMUSG00000113998 AllianceGenome:MGI:5623794
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
13 A3.3; 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (34684105..34690482, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (34500122..34506499, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene 6129 Neighboring gene STARR-seq mESC enhancer starr_34151 Neighboring gene predicted gene, 40908 Neighboring gene STARR-seq mESC enhancer starr_34153 Neighboring gene STARR-seq mESC enhancer starr_34154 Neighboring gene ATP synthase subunit g, mitochondrial pseudogene Neighboring gene STARR-seq mESC enhancer starr_34155 Neighboring gene STARR-seq mESC enhancer starr_34156 Neighboring gene STARR-positive B cell enhancer mm9_chr13:34735014-34735315 Neighboring gene STARR-positive B cell enhancer mm9_chr13:34735430-34735730 Neighboring gene PX domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    34684105..34690482 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_873225.1 RNA Sequence

    Related
    ENSMUST00000223275.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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