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Gm40841 predicted gene, 40841 [ Mus musculus (house mouse) ]

Gene ID: 105245375, updated on 8-Feb-2024

Summary

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Official Symbol
Gm40841provided by MGI
Official Full Name
predicted gene, 40841provided by MGI
Primary source
MGI:MGI:5623726
See related
AllianceGenome:MGI:5623726
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in frontal lobe adult (RPKM 3.3), cortex adult (RPKM 2.9) and 7 other tissues See more
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Genomic context

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Location:
13 A3.1; 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (28580045..28605470, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (28396062..28421499, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_34028 Neighboring gene predicted gene, 34385 Neighboring gene STARR-seq mESC enhancer starr_34029 Neighboring gene predicted gene 3821 Neighboring gene STARR-seq mESC enhancer starr_34031 Neighboring gene RIKEN cDNA 2610307P16 gene Neighboring gene STARR-positive B cell enhancer ABC_E10786 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:28604501-28604741 Neighboring gene STARR-positive B cell enhancer ABC_E8520 Neighboring gene peptidylprolyl isomerase A pseudogene 13_297.1 Neighboring gene STARR-seq mESC enhancer starr_34032 Neighboring gene microRNA 6368

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    28580045..28605470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004938086.1 RNA Sequence

  2. XR_004938088.1 RNA Sequence

  3. XR_003950510.2 RNA Sequence

  4. XR_003950509.2 RNA Sequence

  5. XR_003950508.2 RNA Sequence

  6. XR_003950507.2 RNA Sequence

  7. XR_004938087.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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