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Gm12240 predicted gene 12240 [ Mus musculus (house mouse) ]

Gene ID: 105244171, updated on 8-Feb-2024

Summary

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Official Symbol
Gm12240provided by MGI
Official Full Name
predicted gene 12240provided by MGI
Primary source
MGI:MGI:3649325
See related
AllianceGenome:MGI:3649325
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in genital fat pad adult (RPKM 1.4), adrenal adult (RPKM 1.2) and 21 other tissues See more
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Genomic context

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Location:
11 B1.3; 11 33.57 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (56153308..56160900, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (56262482..56270074, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12239 Neighboring gene STARR-seq mESC enhancer starr_29558 Neighboring gene neuromedin U receptor 2 Neighboring gene predicted gene, 46260 Neighboring gene STARR-seq mESC enhancer starr_29560 Neighboring gene predicted gene, 24253 Neighboring gene STARR-seq mESC enhancer starr_29561 Neighboring gene predicted gene, 32500 Neighboring gene STARR-seq mESC enhancer starr_29562 Neighboring gene zinc finger protein of the cerebellum 5 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_148770.1 

    Range
    101..7693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    56153308..56160900 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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