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Gm39450 predicted gene, 39450 [ Mus musculus (house mouse) ]

Gene ID: 105243561, updated on 8-Feb-2024

Summary

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Official Symbol
Gm39450provided by MGI
Official Full Name
predicted gene, 39450provided by MGI
Primary source
MGI:MGI:5622335
See related
AllianceGenome:MGI:5622335
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39450 in Genome Data Viewer
Location:
9 F3; 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (117547675..117554352)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (117718607..117725284)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RNA binding motif, single stranded interacting protein Neighboring gene STARR-seq mESC enhancer starr_25441 Neighboring gene predicted gene, 17396 Neighboring gene STARR-seq mESC enhancer starr_25443 Neighboring gene STARR-seq mESC enhancer starr_25444 Neighboring gene predicted gene, 39451 Neighboring gene STARR-seq mESC enhancer starr_25445 Neighboring gene STARR-seq mESC enhancer starr_25446 Neighboring gene STARR-seq mESC enhancer starr_25447 Neighboring gene STARR-seq mESC enhancer starr_25448 Neighboring gene STARR-seq mESC enhancer starr_25449 Neighboring gene predicted gene, 26614 Neighboring gene STARR-seq mESC enhancer starr_25450 Neighboring gene predicted gene, 50606 Neighboring gene STARR-positive B cell enhancer ABC_E3864 Neighboring gene STARR-positive B cell enhancer ABC_E2921 Neighboring gene zinc finger, CW type with PWWP domain 2 Neighboring gene 5-azacytidine induced gene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    117547675..117554352
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_871330.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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