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Gm13855 predicted gene 13855 [ Mus musculus (house mouse) ]

Gene ID: 105242626, updated on 8-Feb-2024

Summary

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Official Symbol
Gm13855provided by MGI
Official Full Name
predicted gene 13855provided by MGI
Primary source
MGI:MGI:3652198
See related
AllianceGenome:MGI:3652198
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Is expressed in several structures, including heart; intestine; liver; lung; and metanephros. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in testis adult (RPKM 1.4), liver E14 (RPKM 0.2) and 5 other tissues See more
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Genomic context

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Location:
6 A3.3; 6 14.76 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (34153992..34156312)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (34177048..34179377)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E10372 Neighboring gene predicted gene, 38786 Neighboring gene leucine-rich repeats and guanylate kinase domain containing Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:34079401-34079510 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:34106119-34106374 Neighboring gene solute carrier family 35, member B4 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:34126896-34127097 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:34132037-34132238 Neighboring gene STARR-seq mESC enhancer starr_15530 Neighboring gene predicted gene, 32533 Neighboring gene STARR-seq mESC enhancer starr_15531 Neighboring gene STARR-seq mESC enhancer starr_15532 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:34267489-34267672 Neighboring gene aldo-keto reductase family 1 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. Aboudehen K, et al. J Biol Chem, 2018 Jun 15. PMID 29716997, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    34153992..34156312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_868963.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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