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LINC01044 long intergenic non-protein coding RNA 1044 [ Homo sapiens (human) ]

Gene ID: 104266956, updated on 8-Nov-2023

Summary

Official Symbol
LINC01044provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1044provided by HGNC
Primary source
HGNC:HGNC:49032
See related
Ensembl:ENSG00000223626 AllianceGenome:HGNC:49032
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

Location:
13q34
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (112322567..112331225, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (111568729..111577383, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (112976881..112985539, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984555 Neighboring gene long intergenic non-protein coding RNA 1043 Neighboring gene uncharacterized LOC124903250 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr13:113000836-113001624 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:113004827-113005327 Neighboring gene uncharacterized LOC105370373

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126345.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL160033, AL162499
    Related
    ENST00000413637.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    112322567..112331225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187592.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    123543..132195 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    111568729..111577383 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)