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IGKV1OR9-1 immunoglobulin kappa variable 1/OR9-1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 103352540, updated on 10-Oct-2023

Summary

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Official Symbol
IGKV1OR9-1provided by HGNC
Official Full Name
immunoglobulin kappa variable 1/OR9-1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:49473
See related
IMGT/GENE-DB:IGKV1/OR9-1; AllianceGenome:HGNC:49473
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
IGKV1/OR9-1
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Genomic context

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Location:
9q21.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (65250499..65251012, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (70144105..70144618, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene BMS1 pseudogene 12 Neighboring gene uncharacterized LOC112268045 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70176808-70177339 Neighboring gene forkhead box D4 like 5 Neighboring gene Zn regulated GTPase metalloprotein activator 1D, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70199418-70199944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:70199945-70200469

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_034159.1 

    Range
    101..614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    65250499..65251012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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