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CH507-42P11.6 uncharacterized CH507-42P11.6 [ Homo sapiens (human) ]

Gene ID: 102724398, updated on 10-Mar-2024

Summary

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Gene symbol
CH507-42P11.6
Gene description
uncharacterized CH507-42P11.6
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Annotation information
Note: GeneID:102724398 is on a scaffold that is thought to be a false duplication and thus this gene is likely redundant with GeneID:284836. [11 Jun 2021]
Expression
Low expression observed in reference dataset See more
Orthologs
all
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Genomic context

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Location:
21p12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (6084364..6088242, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene histone H2B type F-S-like Neighboring gene long intergenic non-protein coding RNA 1669 Neighboring gene uncharacterized LOC102724370 Neighboring gene salt inducible kinase 1B (putative) Neighboring gene uncharacterized LOC107987288

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000021.9 Chromosome 21 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_171776.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    CU639417

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    6084364..6088242 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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