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FRG1EP FSHD region gene 1 family member E, pseudogene [ Homo sapiens (human) ]

Gene ID: 102723390, updated on 10-Oct-2023

Summary

Official Symbol
FRG1EPprovided by HGNC
Official Full Name
FSHD region gene 1 family member E, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:51764
See related
AllianceGenome:HGNC:51764
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

Location:
20q11.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (29475879..29497334, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (31108149..31129603, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene angiogenic factor with G-patch and FHA domains 1 pseudogene 10 Neighboring gene uncharacterized LOC105379477 Neighboring gene double homeobox 4 like 35 (pseudogene) Neighboring gene family with sequence similarity 242 member B Neighboring gene CFTR pseudogene 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146067.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    ABBA01031664

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    29475879..29497334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    31108149..31129603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_042232.1: Suppressed sequence

    Description
    NG_042232.1: This RefSeq was removed because it is now thought that this locus is transcribed.