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Phf2os1 PHD finger protein 2, opposite strand 1 [ Mus musculus (house mouse) ]

Gene ID: 102642832, updated on 8-Feb-2024

Summary

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Official Symbol
Phf2os1provided by MGI
Official Full Name
PHD finger protein 2, opposite strand 1provided by MGI
Primary source
MGI:MGI:3645592
See related
AllianceGenome:MGI:3645592
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm8619; EG667415
Expression
Broad expression in thymus adult (RPKM 14.2), CNS E14 (RPKM 2.3) and 15 other tissues See more
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Genomic context

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Location:
13 A5; 13 24.99 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (49024599..49029182)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (48870951..48878349)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L17, pseudogene 6 Neighboring gene VISTA enhancer mm922 Neighboring gene PHD finger protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:48940813-48940996 Neighboring gene family with sequence similarity 120, member A Neighboring gene family with sequence similarity 120A, opposite strand Neighboring gene kinesin family member 11 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Mutagenesis of diploid mammalian genes by gene entrapment. Lin Q, et al. Nucleic Acids Res, 2006. PMID 17062627, Free PMC Article
  2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • Phf2 opposite strand transcript 1

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    49024599..49029182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003950515.2 RNA Sequence

  2. XR_003950516.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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