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Gm38326 predicted gene, 38326 [ Mus musculus (house mouse) ]

Gene ID: 102642162, updated on 8-Feb-2024

Summary

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Official Symbol
Gm38326provided by MGI
Official Full Name
predicted gene, 38326provided by MGI
Primary source
MGI:MGI:5611554
See related
Ensembl:ENSMUSG00000103587 AllianceGenome:MGI:5611554
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm38326 in Genome Data Viewer
Location:
3 D; 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (60695782..60702149)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (60788361..60794728)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 54175 Neighboring gene STARR-positive B cell enhancer ABC_E11186 Neighboring gene CapStarr-seq enhancer MGSCv37_chr3:60320177-60320451 Neighboring gene muscleblind like splicing regulator 1 Neighboring gene STARR-positive B cell enhancer ABC_E1619 Neighboring gene STARR-positive B cell enhancer ABC_E4544 Neighboring gene STARR-positive B cell enhancer ABC_E6056 Neighboring gene STARR-seq mESC enhancer starr_07781 Neighboring gene STARR-positive B cell enhancer ABC_E11187 Neighboring gene STARR-seq mESC enhancer starr_07783 Neighboring gene STARR-seq mESC enhancer starr_07784 Neighboring gene predicted gene, 33707 Neighboring gene STARR-seq mESC enhancer starr_07785 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_07786 Neighboring gene purinergic receptor P2Y, G-protein coupled 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    60695782..60702149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_867333.2 RNA Sequence

    Related
    ENSMUST00000194030.2
Nucleotide Protein Strain
Heading Accession and Version

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