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Gm28578 predicted gene 28578 [ Mus musculus (house mouse) ]

Gene ID: 102639970, updated on 8-Feb-2024

Summary

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Official Symbol
Gm28578provided by MGI
Official Full Name
predicted gene 28578provided by MGI
Primary source
MGI:MGI:5579284
See related
AllianceGenome:MGI:5579284
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
19 C3; 19
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (45318052..45319186, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (45329613..45330747, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene ladybird homeobox 1 Neighboring gene STARR-seq mESC enhancer starr_46267 Neighboring gene STARR-seq mESC enhancer starr_46272 Neighboring gene predicted gene 29595 Neighboring gene STARR-seq mESC enhancer starr_46273 Neighboring gene predicted gene 29593 Neighboring gene STARR-positive B cell enhancer mm9_chr19:45437848-45438148 Neighboring gene beta-transducin repeat containing protein Neighboring gene ribosomal protein S2 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    45318052..45319186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_386755.3 RNA Sequence

Nucleotide Protein
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