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Gm13836 predicted gene 13836 [ Mus musculus (house mouse) ]

Gene ID: 102639758, updated on 8-Feb-2024

Summary

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Official Symbol
Gm13836provided by MGI
Official Full Name
predicted gene 13836provided by MGI
Gene description
40S ribosomal protein S5 pseudogene
Primary source
MGI:MGI:3650922
See related
AllianceGenome:MGI:3650922
Gene type
pseudo
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
5 F; 5 56.1 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (115629815..115630514, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (115491801..115492455, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene sirtuin 4 Neighboring gene predicted gene, 24265 Neighboring gene predicted gene, 24407 Neighboring gene STARR-seq mESC enhancer starr_14130 Neighboring gene paxillin Neighboring gene predicted gene 13840 Neighboring gene STARR-seq mESC enhancer starr_14131 Neighboring gene STARR-seq mESC enhancer starr_14132 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:115984948-115985057 Neighboring gene STARR-positive B cell enhancer ABC_E1687 Neighboring gene STARR-positive B cell enhancer ABC_E671 Neighboring gene ribosomal protein lateral stalk subunit P0

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • 40S ribosomal protein S5 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    115629815..115630514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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