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Gm29050 predicted gene 29050 [ Mus musculus (house mouse) ]

Gene ID: 102638468, updated on 8-Feb-2024

Summary

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Official Symbol
Gm29050provided by MGI
Official Full Name
predicted gene 29050provided by MGI
Primary source
MGI:MGI:5579756
See related
AllianceGenome:MGI:5579756
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Broad expression in testis adult (RPKM 3.6), genital fat pad adult (RPKM 0.6) and 16 other tissues See more
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Genomic context

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Location:
17 A1; 17
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (5461742..5469927)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (5411467..5419652)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene AT-rich interaction domain 1B Neighboring gene STARR-seq mESC enhancer starr_41683 Neighboring gene tubulin, alpha 1B pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10929 Neighboring gene STARR-seq mESC enhancer starr_41685 Neighboring gene predicted gene, 34854 Neighboring gene STARR-seq mESC enhancer starr_41691 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5295725-5295926 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5296016-5296125 Neighboring gene STARR-positive B cell enhancer mm9_chr17:5303477-5303778 Neighboring gene STARR-positive B cell enhancer mm9_chr17:5429429-5429729 Neighboring gene CapStarr-seq enhancer MGSCv37_chr17:5440198-5440381 Neighboring gene transmembrane protein 242 Neighboring gene lactate dehydrogenase A-like 6B Neighboring gene STARR-positive B cell enhancer ABC_E3179 Neighboring gene predicted gene, 52310 Neighboring gene non-SMC condensin II complex, subunit H2 pseudogene Neighboring gene zinc finger, DHHC domain containing 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    5461742..5469927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003952359.1 RNA Sequence

  2. XR_003952361.1 RNA Sequence

  3. XR_001782246.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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