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Gm34583 predicted gene, 34583 [ Mus musculus (house mouse) ]

Gene ID: 102637887, updated on 8-Feb-2024

Summary

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Official Symbol
Gm34583provided by MGI
Official Full Name
predicted gene, 34583provided by MGI
Primary source
MGI:MGI:5593742
See related
AllianceGenome:MGI:5593742
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm42730; Nis-lncRNA
Expression
Biased expression in frontal lobe adult (RPKM 1.5), cortex adult (RPKM 1.0) and 2 other tissues See more
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Genomic context

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Location:
5 C3.3; 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (73528258..73550118)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (73370915..73392775)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene OCIA domain containing 2 Neighboring gene STARR-seq mESC enhancer starr_13385 Neighboring gene predicted gene, 34496 Neighboring gene STARR-seq mESC enhancer starr_13386 Neighboring gene predicted gene, 35960 Neighboring gene cell wall biogenesis 43 C-terminal homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A nerve injury-specific long noncoding RNA promotes neuropathic pain by increasing Ccl2 expression. Du S, et al. J Clin Invest, 2022 Jul 1. PMID 35775484, Free PMC Article
  2. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    73528258..73550118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_377017.2 RNA Sequence

  2. XR_377016.4 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases