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Gm11496 predicted gene 11496 [ Mus musculus (house mouse) ]

Gene ID: 102637854, updated on 8-Feb-2024

Summary

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Official Symbol
Gm11496provided by MGI
Official Full Name
predicted gene 11496provided by MGI
Primary source
MGI:MGI:3649410
See related
AllianceGenome:MGI:3649410
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
11 C; 11 54.34 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (88883712..88890257, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (88992886..88999436, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene transcription elongation factor B (SIII), polypeptide 2 pseudogene Neighboring gene coilin Neighboring gene STARR-seq mESC enhancer starr_30379 Neighboring gene STARR-seq mESC enhancer starr_30380 Neighboring gene STARR-positive B cell enhancer ABC_E9837 Neighboring gene tripartite motif-containing 25 Neighboring gene STARR-positive B cell enhancer ABC_E2363 Neighboring gene STARR-positive B cell enhancer ABC_E5263 Neighboring gene STARR-positive B cell enhancer ABC_E5264 Neighboring gene diacylglycerol kinase, epsilon Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:88919911-88920094 Neighboring gene STARR-positive B cell enhancer ABC_E1840 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:88927428-88927537 Neighboring gene STARR-seq mESC enhancer starr_30387 Neighboring gene diacylglycerol kinase, epsilon, opposite strand Neighboring gene STARR-positive B cell enhancer ABC_E7043 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:88938900-88939236 Neighboring gene predicted gene 525 Neighboring gene STARR-positive B cell enhancer ABC_E8442 Neighboring gene predicted gene, 22534

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Mutagenesis of diploid mammalian genes by gene entrapment. Lin Q, et al. Nucleic Acids Res, 2006. PMID 17062627, Free PMC Article
  2. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  3. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    88883712..88890257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_388949.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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