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Gm13067 predicted gene 13067 [ Mus musculus (house mouse) ]

Gene ID: 102636131, updated on 8-Feb-2024

Summary

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Official Symbol
Gm13067provided by MGI
Official Full Name
predicted gene 13067provided by MGI
Primary source
MGI:MGI:3651968
See related
AllianceGenome:MGI:3651968
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
4 E2; 4 80.81 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (150113611..150143174)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (150029405..150058717)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene splA/ryanodine receptor domain and SOCS box containing 1 Neighboring gene predicted gene 13070 Neighboring gene STARR-seq mESC enhancer starr_12131 Neighboring gene STARR-positive B cell enhancer ABC_E3556 Neighboring gene STARR-positive B cell enhancer ABC_E4732 Neighboring gene STARR-positive B cell enhancer mm9_chr4:149363044-149363345 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:149365064-149365305 Neighboring gene STARR-seq mESC enhancer starr_12133 Neighboring gene hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) Neighboring gene STARR-seq mESC enhancer starr_12135 Neighboring gene STARR-positive B cell enhancer ABC_E6286 Neighboring gene microRNA 34a Neighboring gene STARR-positive B cell enhancer mm9_chr4:149461240-149461541 Neighboring gene G protein-coupled receptor 157

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette. Taniwaki T, et al. Dev Growth Differ, 2005 Apr. PMID 15840001
  2. Exchangeable gene trap using the Cre/mutated lox system. Araki K, et al. Cell Mol Biol (Noisy-le-grand), 1999 Jul. PMID 10512203
  3. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  4. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  5. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    150113611..150143174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004942233.1 RNA Sequence

  2. XR_003955181.2 RNA Sequence

  3. XR_004942235.1 RNA Sequence

  4. XR_004942236.1 RNA Sequence

  5. XR_004942237.1 RNA Sequence

  6. XR_004942234.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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