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2600014E21Rik RIKEN cDNA 2600014E21 gene [ Mus musculus (house mouse) ]

Gene ID: 102635707, updated on 8-Feb-2024

Summary

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Official Symbol
2600014E21Rikprovided by MGI
Official Full Name
RIKEN cDNA 2600014E21 geneprovided by MGI
Primary source
MGI:MGI:1919384
See related
AllianceGenome:MGI:1919384
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13659; Gm38714
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
2 C3; 2 44.61 cM
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (74967999..75152751)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (75137655..75322407)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein S8 pseudogene Neighboring gene STARR-seq mESC enhancer starr_04858 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:74857649-74857758 Neighboring gene STARR-seq mESC enhancer starr_04859 Neighboring gene STARR-seq mESC enhancer starr_04860 Neighboring gene STARR-seq mESC enhancer starr_04861 Neighboring gene predicted gene, 46748 Neighboring gene predicted gene 13652 Neighboring gene ribosomal protein S6, pseudogene 4 Neighboring gene predicted gene 13653 Neighboring gene STARR-seq mESC enhancer starr_04862 Neighboring gene predicted gene, 34401 Neighboring gene STARR-positive B cell enhancer mm9_chr2:75150393-75150694 Neighboring gene predicted gene, 39857 Neighboring gene fucosidase, alpha-L- 1, tissue pseudogene Neighboring gene predicted gene, 32927 Neighboring gene predicted gene, 39856

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The HoxD cluster is a dynamic and resilient TAD boundary controlling the segregation of antagonistic regulatory landscapes. Rodríguez-Carballo E, et al. Genes Dev, 2017 Nov 15. PMID 29273679, Free PMC Article
  2. Multiple enhancers regulate Hoxd genes and the Hotdog LncRNA during cecum budding. Delpretti S, et al. Cell Rep, 2013 Oct 17. PMID 24075990
  3. Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes. Bulfone A, et al. J Neurosci, 2005 Aug 17. PMID 16107646, Free PMC Article
  4. The Vertebrate Genome Annotation browser 10 years on. Harrow JL, et al. Nucleic Acids Res, 2014 Jan. PMID 24316575, Free PMC Article
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    74967999..75152751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004941124.1 RNA Sequence

  2. XR_001783338.2 RNA Sequence

  3. XR_001783353.2 RNA Sequence

  4. XR_001783345.2 RNA Sequence

  5. XR_001783352.2 RNA Sequence

  6. XR_001783365.2 RNA Sequence

  7. XR_001783356.2 RNA Sequence

  8. XR_001783367.2 RNA Sequence

  9. XR_001783354.2 RNA Sequence

  10. XR_001783343.2 RNA Sequence

  11. XR_001783336.3 RNA Sequence

  12. XR_001783341.3 RNA Sequence

  13. XR_001783337.3 RNA Sequence

  14. XR_001783342.3 RNA Sequence

  15. XR_001783348.3 RNA Sequence

  16. XR_001783346.3 RNA Sequence

  17. XR_001783349.2 RNA Sequence

  18. XR_001783351.2 RNA Sequence

  19. XR_001783350.2 RNA Sequence

  20. XR_001783369.3 RNA Sequence

  21. XR_001783355.2 RNA Sequence

  22. XR_001783361.2 RNA Sequence

  23. XR_001783344.2 RNA Sequence

  24. XR_001783339.3 RNA Sequence

  25. XR_001783340.3 RNA Sequence

  26. XR_001783347.2 RNA Sequence

  27. XR_001783363.3 RNA Sequence

  28. XR_001783357.3 RNA Sequence

  29. XR_001783368.3 RNA Sequence

  30. XR_001783358.3 RNA Sequence

  31. XR_001783359.3 RNA Sequence

  32. XR_001783370.3 RNA Sequence

  33. XR_001783372.3 RNA Sequence

  34. XR_001783360.2 RNA Sequence

  35. XR_001783362.2 RNA Sequence

  36. XR_866464.3 RNA Sequence

  37. XR_001783364.2 RNA Sequence

  38. XR_001783371.2 RNA Sequence

  39. XR_001783373.2 RNA Sequence

  40. XR_003953856.2 RNA Sequence

  41. XR_866463.1 RNA Sequence

  42. XR_004941123.1 RNA Sequence

  43. XR_001783366.1 RNA Sequence

Nucleotide Protein Strain
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